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Cicatriiz

Healthcare MCP Server

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Healthcare MCP Server

A Model Context Protocol (MCP) server providing AI assistants with access to healthcare data and medical information tools.

Overview

Healthcare MCP Server is a specialized Node.js server that implements the Model Context Protocol (MCP) to provide AI assistants with access to healthcare data and medical information tools. It enables AI models to retrieve accurate, up-to-date medical information from authoritative sources. This repository provides a single DXT package containing the complete Node.js implementation.

Related MCP server: Smart EHR MCP Server

DXT Extension

This repository includes a packaged DXT (Desktop Extension) file for easy installation in compatible development environments. Download healthcare-mcp.dxt for one-click installation.

Features

  • FDA Drug Information: Search and retrieve comprehensive drug information from the FDA database (improved response parsing)

  • PubMed Research: Search medical literature from PubMed's database of scientific articles

  • Health Topics: Access evidence-based health information from Health.gov (updated to API v4)

  • Clinical Trials: Search for ongoing and completed clinical trials (updated API parameters)

  • Medical Terminology: Look up ICD-10 codes and medical terminology definitions

  • medRxiv Search: Search for pre-print articles on medRxiv

  • Medical Calculator: Calculate Body Mass Index (BMI)

  • NCBI Bookshelf Search: Search the NCBI Bookshelf for biomedical books and documents

  • DICOM Metadata Extraction: Extract metadata from a DICOM file

  • Caching: Efficient caching system with connection pooling to reduce API calls and improve performance

  • Usage Tracking: Anonymous usage tracking to monitor API usage

  • Error Handling: Robust error handling and logging

  • Multiple Interfaces: Support for both stdio (for CLI) and HTTP/SSE interfaces

  • API Documentation: Interactive API documentation with Swagger UI

  • Comprehensive Testing: Extensive test suite with Node.js testing and API verification

Installation

Option 1: DXT Extension (Recommended)

  1. Download healthcare-mcp.dxt from this repository

  2. Open with your compatible MCP client (such as Claude Desktop)

  3. Follow the installation prompts

  4. Configure optional settings through the GUI

Option 2: Installing via Smithery

To install Healthcare Data and Medical Information Server for Claude Desktop automatically via Smithery:

npx -y @smithery/cli install @Cicatriiz/healthcare-mcp-public --client claude

Option 3: npm Installation

  1. Install the package:

    npm install healthcare-mcp

  2. Run the server:

    npx healthcare-mcp

Option 4: Manual Installation from Source

  1. Clone the repository:

    git clone https://github.com/Cicatriiz/healthcare-mcp-public.git
cd healthcare-mcp-public/server

  2. Install dependencies:

    npm install

  3. Set up environment variables (optional):

    # Create .env file from example
cp .env.example .env
# Edit .env with your API keys (optional)

  4. Run the server:

    npm start

Usage

Running the Server

  • stdio mode (default, for MCP clients):

    npm start

  • HTTP/SSE mode (for web clients):

    npm run server:http

Testing the Tools

You can test the MCP tools using the built-in test scripts:

# Test all tools
npm test

# Test individual tools
npm run test:fda        # Test FDA drug lookup
npm run test:pubmed     # Test PubMed search
npm run test:health     # Test Health Topics
npm run test:trials     # Test Clinical Trials search
npm run test:icd        # Test ICD-10 code lookup

API Reference

The Healthcare MCP Server provides both a programmatic API for direct integration and a RESTful HTTP API for web clients.

RESTful API Endpoints

When running in HTTP mode, the following endpoints are available:

Health Check

GET /health

Returns the status of the server and its services.

FDA Drug Lookup

GET /api/fda?drug_name={drug_name}&search_type={search_type}

Parameters:

  • drug_name: Name of the drug to search for

  • search_type: Type of information to retrieve

    • general: Basic drug information (default)

    • label: Drug labeling information

    • adverse_events: Reported adverse events

Example Response:

{
  "status": "success",
  "drug_name": "aspirin",
  "search_type": "general",
  "total_results": 25,
  "results": [
    {
      "brand_name": "ASPIRIN",
      "generic_name": "ASPIRIN",
      "manufacturer": "Bayer Healthcare",
      "product_type": "HUMAN OTC DRUG",
      "route": "ORAL",
      "active_ingredients": [
        {
          "name": "ASPIRIN",
          "strength": "325 mg/1"
        }
      ]
    }
  ]
}

PubMed Search

GET /api/pubmed?query={query}&max_results={max_results}&date_range={date_range}

Parameters:

  • query: Search query for medical literature

  • max_results: Maximum number of results to return (default: 5, max: 50)

  • date_range: Limit to articles published within years (e.g. '5' for last 5 years)

Example Response:

{
  "status": "success",
  "query": "diabetes treatment",
  "total_results": 123456,
  "date_range": "5",
  "articles": [
    {
      "pmid": "12345678",
      "title": "New advances in diabetes treatment",
      "authors": ["Smith J", "Johnson A"],
      "journal": "Journal of Diabetes Research",
      "publication_date": "2023-01-15",
      "abstract": "This study explores new treatment options...",
      "url": "https://pubmed.ncbi.nlm.nih.gov/12345678/"
    }
  ]
}

Health Topics

GET /api/health_finder?topic={topic}&language={language}

Parameters:

  • topic: Health topic to search for information

  • language: Language for content (en or es, default: en)

Example Response:

{
  "status": "success",
  "search_term": "diabetes",
  "language": "en",
  "total_results": 15,
  "topics": [
    {
      "title": "Diabetes Type 2",
      "url": "https://health.gov/myhealthfinder/topics/health-conditions/diabetes/diabetes-type-2",
      "last_updated": "2023-05-20",
      "section": "Health Conditions",
      "description": "Information about managing type 2 diabetes",
      "content": ["Diabetes is a disease...", "Treatment options include..."]
    }
  ]
}

Clinical Trials Search

GET /api/clinical_trials?condition={condition}&status={status}&max_results={max_results}

Parameters:

  • condition: Medical condition or disease to search for

  • status: Trial status (recruiting, completed, active, not_recruiting, or all)

  • max_results: Maximum number of results to return (default: 10, max: 100)

Example Response:

{
  "status": "success",
  "condition": "breast cancer",
  "search_status": "recruiting",
  "total_results": 256,
  "trials": [
    {
      "nct_id": "NCT12345678",
      "title": "Study of New Treatment for Breast Cancer",
      "status": "Recruiting",
      "phase": "Phase 2",
      "study_type": "Interventional",
      "conditions": ["Breast Cancer", "HER2-positive Breast Cancer"],
      "locations": [
        {
          "facility": "Memorial Hospital",
          "city": "New York",
          "state": "NY",
          "country": "United States"
        }
      ],
      "sponsor": "National Cancer Institute",
      "url": "https://clinicaltrials.gov/study/NCT12345678",
      "eligibility": {
        "gender": "Female",
        "min_age": "18 Years",
        "max_age": "75 Years",
        "healthy_volunteers": "No"
      }
    }
  ]
}

ICD-10 Code Lookup

GET /api/medical_terminology?code={code}&description={description}&max_results={max_results}

Parameters:

  • code: ICD-10 code to look up (optional if description is provided)

  • description: Medical condition description to search for (optional if code is provided)

  • max_results: Maximum number of results to return (default: 10, max: 50)

Example Response:

{
  "status": "success",
  "search_type": "description",
  "search_term": "diabetes",
  "total_results": 25,
  "codes": [
    {
      "code": "E11",
      "description": "Type 2 diabetes mellitus",
      "category": "Endocrine, nutritional and metabolic diseases"
    },
    {
      "code": "E10",
      "description": "Type 1 diabetes mellitus",
      "category": "Endocrine, nutritional and metabolic diseases"
    }
  ]
}

Generic Tool Execution

POST /mcp/call-tool

Request Body:

{
  "name": "fda_drug_lookup",
  "arguments": {
    "drug_name": "aspirin",
    "search_type": "general"
  },
  "session_id": "optional-session-id"
}

MCP Tools

When using the MCP server through compatible clients, the following tools are available:

FDA Drug Lookup

fda_drug_lookup(drug_name, search_type = "general")

Parameters:

  • drug_name: Name of the drug to search for

  • search_type: Type of information to retrieve

    • general: Basic drug information (default)

    • label: Drug labeling information

    • adverse_events: Reported adverse events

PubMed Search

pubmed_search(query, max_results = 5, date_range = "")

Parameters:

  • query: Search query for medical literature

  • max_results: Maximum number of results to return (default: 5)

  • date_range: Limit to articles published within years (e.g. '5' for last 5 years)

Health Topics

health_topics(topic, language = "en")

Parameters:

  • topic: Health topic to search for information

  • language: Language for content (en or es, default: en)

Clinical Trials Search

clinical_trials_search(condition, status = "recruiting", max_results = 10)

Parameters:

  • condition: Medical condition or disease to search for

  • status: Trial status (recruiting, completed, active, not_recruiting, or all)

  • max_results: Maximum number of results to return

ICD-10 Code Lookup

lookup_icd_code(code = null, description = null, max_results = 10)

Parameters:

  • code: ICD-10 code to look up (optional if description is provided)

  • description: Medical condition description to search for (optional if code is provided)

  • max_results: Maximum number of results to return

medRxiv Search

medrxiv_search(query, max_results = 10)

Parameters:

  • query: Search query for medRxiv articles

  • max_results: Maximum number of results to return

Calculate BMI

calculate_bmi(height_meters, weight_kg)

Parameters:

  • height_meters: Height in meters

  • weight_kg: Weight in kilograms

NCBI Bookshelf Search

ncbi_bookshelf_search(query, max_results = 10)

Parameters:

  • query: Search query for NCBI Bookshelf

  • max_results: Maximum number of results to return

Extract DICOM Metadata

extract_dicom_metadata(file_path)

Parameters:

  • file_path: Path to the DICOM file

Data Sources

This MCP server utilizes several publicly available healthcare APIs:

License

MIT License

Available Tools

7 tools
fda_drug_lookupC

Look up drug information from the FDA database

ParametersJSON Schema
NameRequiredDescriptionDefault
drug_nameYesName of the drug to search for
search_typeNoType of information to retrieve: 'label', 'adverse_events', or 'general'general

TDQS

C2.9/5.0
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

With no annotations provided, the description carries the full burden of behavioral disclosure but only states the basic action. It doesn't cover aspects like rate limits, authentication needs, response format, or potential errors (e.g., drug not found), which are critical for a lookup tool interacting with an external database.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is a single, clear sentence with no wasted words, making it easy to parse and front-loaded with essential information. It efficiently communicates the core purpose without unnecessary elaboration.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given the complexity of an FDA database lookup with no annotations and no output schema, the description is insufficient. It lacks details on what information is returned, how results are structured, or any behavioral traits, leaving significant gaps for the agent to understand the tool's operation fully.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The schema description coverage is 100%, with clear descriptions for both parameters, including an enum for 'search_type'. The description adds no additional parameter information beyond what the schema provides, so it meets the baseline score of 3 without compensating or detracting.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the action ('Look up') and resource ('drug information from the FDA database'), making the tool's purpose immediately understandable. However, it doesn't differentiate from sibling tools like 'clinical_trials_search' or 'pubmed_search' which also involve medical data lookup, missing an opportunity for clearer distinction.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance is provided on when to use this tool versus alternatives. The description doesn't mention sibling tools or specify use cases like FDA-specific regulatory information versus clinical trials or PubMed articles, leaving the agent without context for selection.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

get_all_usage_statsB

Get overall usage statistics for all sessions

ParametersJSON Schema
NameRequiredDescriptionDefault

No parameters

TDQS

B3.1/5.0
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

With no annotations provided, the description carries the full burden of behavioral disclosure. It states it 'gets' data, implying a read-only operation, but doesn't specify if it requires authentication, has rate limits, returns aggregated or raw data, or any other behavioral traits. This leaves significant gaps for a tool that likely accesses usage data.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is a single, clear sentence with no wasted words. It front-loads the key action and resource, making it highly efficient and easy to parse for an AI agent.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given the lack of annotations and output schema, the description is incomplete. It doesn't explain what 'overall usage statistics' includes (e.g., metrics, time frames, format) or behavioral aspects like data freshness or access controls. For a tool that likely returns complex data, this leaves too much undefined.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The input schema has 0 parameters with 100% coverage, so no parameter documentation is needed. The description appropriately doesn't mention parameters, aligning with the schema. A baseline of 4 is applied since it doesn't add unnecessary details, though it could briefly note the lack of parameters for clarity.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the verb ('Get') and resource ('overall usage statistics for all sessions'), making the purpose immediately understandable. It doesn't differentiate from its sibling 'get_usage_stats', which appears to be a similar tool, so it doesn't reach the highest score for sibling distinction.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description provides no guidance on when to use this tool versus alternatives like 'get_usage_stats' or other siblings. It lacks context about prerequisites, timing, or comparisons, leaving the agent to infer usage based on the name alone.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

get_usage_statsB

Get usage statistics for the current session

ParametersJSON Schema
NameRequiredDescriptionDefault

No parameters

TDQS

B3.1/5.0
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

With no annotations provided, the description carries full burden but only states what the tool does, not how it behaves. It doesn't disclose whether this is a read-only operation, what permissions are needed, rate limits, error conditions, or return format. Significant behavioral context is missing.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is a single, efficient sentence that directly states the tool's purpose with zero wasted words. It's appropriately sized for a zero-parameter tool and front-loads the essential information.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a tool with no annotations and no output schema, the description is insufficiently complete. It doesn't explain what 'usage statistics' includes, the format of returned data, or behavioral aspects like whether this requires authentication or has side effects.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The tool has 0 parameters with 100% schema description coverage, so no parameter documentation is needed. The description appropriately doesn't discuss parameters, maintaining focus on the tool's purpose without unnecessary detail.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the verb ('Get') and resource ('usage statistics') with scope ('for the current session'), making the purpose understandable. It doesn't explicitly differentiate from sibling 'get_all_usage_stats', but the 'current session' scope provides implicit distinction.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No explicit guidance on when to use this tool versus alternatives like 'get_all_usage_stats' is provided. The description implies usage for current session statistics but doesn't mention prerequisites, exclusions, or comparison with sibling tools.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

health_topicsC

Get evidence-based health information on various topics

ParametersJSON Schema
NameRequiredDescriptionDefault
languageNoLanguage for content (en or es)en
topicYesHealth topic to search for information

TDQS

C2.9/5.0
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations are provided, so the description carries the full burden of behavioral disclosure. It states the tool 'gets' information, implying a read-only operation, but does not clarify aspects like data sources, accuracy, rate limits, or authentication needs. For a health information tool with zero annotation coverage, this is a significant gap in transparency.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is a single, efficient sentence that is front-loaded with the core purpose. It avoids redundancy and waste, making it easy to parse quickly. Every word contributes to understanding the tool's function without unnecessary elaboration.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given the lack of annotations and output schema, the description is incomplete for a health information tool. It does not address critical context like data reliability, source attribution, or response format, which are important for an agent to use the tool effectively. The description alone is insufficient for safe and informed usage.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The input schema has 100% description coverage, fully documenting both parameters ('language' and 'topic'). The description adds no additional semantic context beyond what the schema provides, such as examples of valid topics or language implications. With high schema coverage, the baseline score of 3 is appropriate, as the description does not compensate but also does not detract.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the tool's purpose as 'Get evidence-based health information on various topics,' which specifies the action (get), resource (health information), and key attributes (evidence-based, various topics). It distinguishes from siblings like 'clinical_trials_search' or 'pubmed_search' by focusing on general health topics rather than specific databases or codes, though it could be more explicit about the distinction.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description provides no guidance on when to use this tool versus alternatives. It does not mention any context, prerequisites, or exclusions, such as when to prefer 'pubmed_search' for academic literature or 'lookup_icd_code' for medical coding. This leaves the agent without explicit usage instructions.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

lookup_icd_codeC

Look up ICD-10 codes by code or description

ParametersJSON Schema
NameRequiredDescriptionDefault
codeNoICD-10 code to look up (optional if description is provided)
descriptionNoMedical condition description to search for (optional if code is provided)
max_resultsNoMaximum number of results to return

TDQS

C2.9/5.0
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations are provided, so the description carries the full burden of behavioral disclosure. It states the lookup action but doesn't describe traits like whether it's read-only, requires authentication, has rate limits, returns structured data, or handles errors. For a tool with zero annotation coverage, this is a significant gap in transparency.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is a single, efficient sentence with zero waste. It's front-loaded with the core purpose and appropriately sized for a simple lookup tool, making it easy to parse quickly.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given the lack of annotations and output schema, the description is incomplete. It doesn't explain what the tool returns (e.g., code details, descriptions), behavioral aspects, or error handling. For a tool with 3 parameters and no structured output info, more context is needed to guide effective use.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The schema description coverage is 100%, so the schema already documents all parameters (code, description, max_results) with details like optionality and constraints. The description adds no additional meaning beyond what the schema provides, such as explaining search logic or result format. Baseline 3 is appropriate when the schema does the heavy lifting.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the tool's purpose: 'Look up ICD-10 codes by code or description.' It specifies the verb ('look up'), resource ('ICD-10 codes'), and two search methods. However, it doesn't explicitly distinguish this from sibling tools like 'health_topics' or 'pubmed_search', which might also involve medical information retrieval but for different resources.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description provides no guidance on when to use this tool versus alternatives. It doesn't mention sibling tools or clarify scenarios where this lookup is preferred over others (e.g., 'clinical_trials_search' for trial data). Usage is implied by the purpose but lacks explicit context or exclusions.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

Tool Schema Changelog

Recent tool additions, removals, and schema changes observed during successful MCP inspections. Dates show when Glama detected each change.

  1. 7 tool updatesv1.0.0
    • First observedclinical_trials_search
    • First observedfda_drug_lookup
    • First observedget_all_usage_stats
    • First observedget_usage_stats
    • First observedhealth_topics
    • First observedlookup_icd_code
    • First observedpubmed_search
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TDQS

B3.3/5.0
Disambiguation4/5

Most tools have distinct purposes targeting different healthcare data sources like clinical trials, drugs, health topics, ICD codes, and PubMed. However, get_all_usage_stats and get_usage_stats overlap in functionality, both dealing with usage statistics, which could cause confusion in selection.

Naming Consistency3/5

The naming is mixed with some tools using verb_noun patterns like clinical_trials_search and pubmed_search, while others use noun phrases like health_topics or lookup_icd_code. This inconsistency reduces predictability but remains readable overall.

Tool Count5/5

With 7 tools, the count is well-scoped for a healthcare server, covering key areas like drug info, medical literature, coding, and trials. Each tool appears to earn its place without being overwhelming or insufficient.

Completeness4/5

The toolset provides broad coverage for healthcare information retrieval, including drugs, literature, codes, and trials. A minor gap exists in lacking update or management tools for these resources, but agents can work effectively with the search and lookup functions provided.

Maintenance

ActivityInactive
ResponsivenessSyncing

Resources

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