"Using MySQL to Search a Database" matching MCP connectors:
GET /v1/connectors — MCP directory API referenceMatching Connector Tools:
Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.
Protein research over UniProtKB — search by function, fetch curated records, map IDs, proteomes.
Read-only MCP connector for The Dose Guy source-linked peptide and compound database. Search 260+ compounds, compare vendors and prices, inspect ranking evidence, and retrieve canonical page links. No authentication required.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.
RCSB PDB MCP — experimentally determined macromolecular structures.
GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.
UniProt MCP — protein sequence + function database.
Ensembl REST — vertebrate genomes, sequences, comparative genomics, variation
Search and resolve Naturepedia, Robbie's Razor, and GC-MRD-v2.0 canonical resources.
Bioregistry — meta-registry of biomedical identifier prefixes
ChEMBL MCP — drug discovery database (EBI).
WikiPathways MCP — open community pathway database.
MetaboLights MCP — EBI's metabolomics study repository.
GTEx — Genotype-Tissue Expression human gene-expression atlas
