"A tool for analyzing SQL database structure and functionality" matching MCP connectors:
GET /v1/connectors — MCP directory API referenceMatching Connector Tools:
Helena Bioinformatics MCP for clinical variant interpretation, ACMG/AMP evidence and literature.
Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.
Read-only MCP connector for The Dose Guy source-linked peptide and compound database. Search 260+ compounds, compare vendors and prices, inspect ranking evidence, and retrieve canonical page links. No authentication required.
Deterministic peptide reconstitution and dosing math, so assistants compute it instead of guessing.
PK serum simulation, reconstitution math and compound data for agents. Paid tools $0.01 via x402.
Look up allele frequencies by ancestry, gene constraint, variants, and coverage over gnomAD.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.
UniProt MCP — protein sequence + function database.
Search and resolve Naturepedia, Robbie's Razor, and GC-MRD-v2.0 canonical resources.
ChEMBL MCP — drug discovery database (EBI).
WikiPathways MCP — open community pathway database.
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
Reactome biological pathway database
Canine genomics for agents: breed allele frequencies, AI pathogenicity + OMIA clinical disease layer
Biotech rNPV/PoS engine for AI agents. Signed exports, evidence register, asset landscape.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
