MCP connectors by io.github.pipeworx-io

Encyclopedia of Life (EOL) — biodiversity taxa, names, hierarchies

eLife MCP — keyless open-access life-sciences & biomedical journal articles.

MyVariant.info MCP.

PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.

RCSB PDB MCP — experimentally determined macromolecular structures.

GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.

EBI Expression Atlas MCP.

UniProt MCP — protein sequence + function database.

Ensembl REST — vertebrate genomes, sequences, comparative genomics, variation

FDA medical-device regulatory intelligence from keyless openFDA datasets.

Broad Institute gnomAD genomic variant database (GraphQL)

WikiPathways MCP — open community pathway database.

MetaboLights MCP — EBI's metabolomics study repository.

GTEx — Genotype-Tissue Expression human gene-expression atlas

STRING protein-protein interaction networks across ~12k organisms

Human Phenotype Ontology — clinical phenotype terms + gene/disease annotations

Open Tree of Life MCP.

iDigBio biodiversity specimen MCP.

cBioPortal MCP — cancer genomics portal.

GBIF MCP — wraps the Global Biodiversity Information Facility API v1 (free, no auth)