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Glama

Reactome

by io.github.pipeworx-io

Discover Tools

discover_tools
Read-onlyIdempotent

Find tools by describing the data or task. Use when you need to browse, search, look up, or discover what tools exist for: SEC filings, financials, revenue, profit, FDA drugs, adverse events, FRED economic data, Census demographics, BLS jobs/unemployment/inflation, ATTOM real estate, ClinicalTrials, USPTO patents, weather, news, crypto, stocks. Returns the top-N most relevant tools with names, descriptions, and full input schemas (with curated examples) — each result is ready to call directly, no second schema lookup needed. Call this FIRST when you have many tools available and want to see the option set (not just one answer).

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
qNoAlias for query.
taskNoAlias for query.
limitNoMaximum number of tools to return (default 20, max 50)
queryYesNatural language description of what you want to do (e.g., "analyze housing market trends", "look up FDA drug approvals", "find trade data between countries"). Accepts task, q, description, search as aliases.
searchNoAlias for query.
descriptionNoAlias for query.

Schema Changelog

Changes observed during successful MCP inspections. Dates show when Glama detected each change.

  1. Changed5 schema fields changed
    • addedInput schema / properties / description
      Added value: +{
+  "description": "Alias for query.",
+  "type": "string"
+}
    • addedInput schema / properties / q
      Added value: +{
+  "description": "Alias for query.",
+  "type": "string"
+}
    • changedInput schema / properties / query / description
      Previous value: -"Natural language description of what you want to do (e.g., \"analyze housing market trends\", \"look up FDA drug approvals\", \"find trade data between countries\")"New value: +"Natural language description of what you want to do (e.g., \"analyze housing market trends\", \"look up FDA drug approvals\", \"find trade data between countries\"). Accepts task, q, description, search as aliases."
    • addedInput schema / properties / search
      Added value: +{
+  "description": "Alias for query.",
+  "type": "string"
+}
    • addedInput schema / properties / task
      Added value: +{
+  "description": "Alias for query.",
+  "type": "string"
+}
  2. Changed1 schema field changed
    • addedInput schema / examples
      Added value: +[
+  {
+    "query": "look up FDA drug approvals"
+  },
+  {
+    "query": "analyze housing market trends"
+  }
+]
  3. First observed

TDQS

A4.2/5.0
Behavior4/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations already declare readOnlyHint=true, idempotentHint=true, and destructiveHint=false. The description adds value beyond these by detailing what the tool returns: 'top-N most relevant tools with names, descriptions, and full input schemas (with curated examples)' and that results are 'ready to call directly, no second schema lookup needed.' No contradictions with annotations.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness4/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is front-loaded with the core purpose and includes actionable usage guidance. The long list of data categories is useful for scoping the tool's coverage, though the list of synonyms ('browse, search, look up, or discover') is slightly redundant. Overall, it is appropriately sized for a discovery tool.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness5/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

The description is complete for a discovery tool with no output schema. It explains what it returns (top-N relevant tools, names, descriptions, full input schemas, curated examples), states that results are directly callable, and provides clear 'when to use' guidance. The schema covers all parameters, and the description fills the return-value gap adequately.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 100%, so the baseline is 3. The description does not add much beyond the schema for parameters; it only reinforces the query concept ('describing the data or task'). The schema itself already documents the 'query' field and its aliases with examples, so the description adds marginal value.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states a specific verb and resource: 'Find tools by describing the data or task,' and further elaborates with concrete domains (SEC filings, financials, FDA drugs, etc.). It distinguishes itself from sibling tools by emphasizing 'Call this FIRST when you have many tools available and want to see the option set (not just one answer).'

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines4/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description gives explicit usage context: 'Use when you need to browse, search, look up, or discover what tools exist for...' and prescribes 'Call this FIRST...' when many tools are available. It does not explicitly name alternatives or when-not-to-use, but the context is clear enough to guide an agent.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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TDQS

B3.1/5.0
Disambiguation2/5

Many tools have overlapping research purposes (ask_pipeworx, deep_research, ask_pipeworx_grounded) and multiple bet-related tools (bet_research, polymarket_arbitrage, polymarket_edges). Reactome-specific tools are few but mixed in with unrelated tools, causing ambiguity.

Naming Consistency2/5

Tool names are inconsistent: some snake_case (ask_pipeworx, deep_research), some camelCase (generate_llms_txt, list_subscriptions), and some mixed (pipeworx_feedback, poly market_arbitrage). No uniform pattern.

Tool Count2/5

35 tools is excessive for a Reactome server, as only a handful are Reactome-specific. Many tools are unrelated (e.g., bet_research, compare_entities), making the tool count feel bloated and unfocused.

Completeness2/5

The Reactome-specific tools cover basic pathway lookups but miss key operations like reactions, complexes, or advanced queries. The server's completeness for the Reactome domain is poor, diluted by many non-Reactome tools.

Resources